ggseg r-universe repositoryhttps://ggseg.r-universe.devPackage updated in ggsegcranlike-server 0.16.70https://github.com/ggseg.png?size=400ggseg r-universe repositoryhttps://ggseg.r-universe.devMon, 27 Nov 2023 18:52:56 GMT[ggseg] freesurfer 1.6.9muschellij2@gmail.com (John Muschelli)Wrapper functions that interface with 'Freesurfer'
<https://surfer.nmr.mgh.harvard.edu/>, a powerful and
commonly-used 'neuroimaging' software, using system commands.
The goal is to be able to interface with 'Freesurfer'
completely in R, where you pass R objects of class 'nifti',
implemented by package 'oro.nifti', and the function executes
an 'Freesurfer' command and returns an R object of class
'nifti' or necessary output.https://github.com/r-universe/ggseg/actions/runs/7009628335Mon, 27 Nov 2023 18:52:56 GMTfreesurfer1.6.9successhttps://ggseg.r-universe.devhttps://github.com/muschellij2/freesurferexploring_included_data.Rmdexploring_included_data.htmlExploring Included Subject Freesurfer Data2017-03-06 17:02:522020-12-08 17:38:44[ggseg] ggseg3d 1.6.3a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)Mainly contains a plotting function ggseg3d(), and data of
two standard brain atlases (Desikan-Killiany and aseg). By far,
the largest bit of the package is the data for each of the
atlases. The functions and data enable users to plot
tri-surface mesh plots of brain atlases, and customise these by
projecting colours onto the brain segments based on values in
their own data sets. Functions are wrappers for 'plotly'.
Mowinckel & Vidal-Piñeiro (2020)
<doi:10.1177/2515245920928009>.https://github.com/r-universe/ggseg/actions/runs/6953028893Mon, 23 Oct 2023 09:01:59 GMTggseg3d1.6.3successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggseg3d[ggseg] ggsegYeo2011 1.0.2.002a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d
packages. It contains the Yeo 2011 atlases to plot using
functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/7056147322Fri, 05 May 2023 11:26:39 GMTggsegYeo20111.0.2.002successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegYeo2011[ggseg] ggsegICBM 1.0.1a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d
packages. It contains the ICBM atlases to plot using functions
from those two packages.https://github.com/r-universe/ggseg/actions/runs/7056147337Fri, 05 May 2023 10:09:55 GMTggsegICBM1.0.1successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegICBM[ggseg] ggseg 1.6.6a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)Contains 'ggplot2' geom for plotting brain atlases using
simple features. The largest component of the package is the
data for the two built-in atlases. Mowinckel & Vidal-Piñeiro
(2020) <doi:10.1177/2515245920928009>.https://github.com/r-universe/ggseg/actions/runs/6993503859Fri, 31 Mar 2023 09:00:28 GMTggseg1.6.6successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegexternalData.RmdexternalData.htmlAdding external data to ggseg plotting2018-09-03 20:51:252021-08-13 10:31:08freesurfer_files.Rmdfreesurfer_files.htmlRead in files from FreeSurfer2020-03-04 13:16:272021-08-10 08:34:58ggseg.Rmdggseg.htmlUsing geom_brain2018-08-30 08:38:292022-06-13 06:28:31[ggseg] ggsegExtra 1.5.33.004a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)Contains functions to create new data sets compatible with the 'ggseg' and 'ggseg3d'
packages for plotting brain segmentations through R. Requires several external software to
be installed on the system for atlas creations to work, and most of these are not available
for windows. But atlas creation tools exist for 2d simple features data, and also 3d tri-surface
mesh plots. Also has a list of compatible data sets and functions for easy installation of these.https://github.com/r-universe/ggseg/actions/runs/6675368356Mon, 02 May 2022 12:52:33 GMTggsegExtra1.5.33.004failurehttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegExtra[ggseg] ggsegSchaefer 2.0.4a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d packages.
It contains the Schaefer atlases to plot using functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/6845816444Thu, 24 Feb 2022 08:46:34 GMTggsegSchaefer2.0.4successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegSchaefer[ggseg] ggsegChen 1.0.01a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d
packages. It contains the Chen atlases to plot using functions
from those two packages.https://github.com/r-universe/ggseg/actions/runs/6993503855Fri, 17 Dec 2021 09:45:50 GMTggsegChen1.0.01successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegChen[ggseg] ggsegHO 1.0.2.001a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d
packages. It contains the Harvard-Oxford cortical atlases to
plot using functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/7074813076Fri, 17 Dec 2021 09:44:18 GMTggsegHO1.0.2.001successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegHO[ggseg] ggsegKleist 0.0.1a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d
packages. It contains the historical Kleist atlases to plot
using functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/6987165356Wed, 08 Dec 2021 08:50:27 GMTggsegKleist0.0.1successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegKleist[ggseg] ggsegArslan 0.0.1a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d
packages. It contains the arslan atlases to plot using
functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/7056147455Wed, 08 Dec 2021 08:49:24 GMTggsegArslan0.0.1successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegArslan[ggseg] ggsegFlechsig 0.0.1a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d
packages. It contains the Flechsig atlases to plot using
functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/6953028890Wed, 08 Dec 2021 08:48:24 GMTggsegFlechsig0.0.1successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegFlechsig[ggseg] ggsegEconomo 0.0.1a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d packages.
It contains the economo atlases to plot using functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/6838664682Tue, 07 Dec 2021 09:06:26 GMTggsegEconomo0.0.1successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegEconomo[ggseg] ggsegGlasser 1.0.01a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d packages.
It contains the Glasser atlases to plot using functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/6838614646Mon, 15 Nov 2021 08:57:35 GMTggsegGlasser1.0.01successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegGlasser[ggseg] ggsegAal 0.0.1a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d
packages. It contains the aal atlases to plot using functions
from those two packages.https://github.com/r-universe/ggseg/actions/runs/7068136588Wed, 10 Nov 2021 15:05:14 GMTggsegAal0.0.1successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegAal[ggseg] ggsegGordon 0.0.1a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d
packages. It contains the gordon atlases to plot using
functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/6993503870Wed, 10 Nov 2021 15:02:01 GMTggsegGordon0.0.1successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegGordon[ggseg] ggsegAicha 0.0.1a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d
packages. It contains the aicha atlases to plot using functions
from those two packages.https://github.com/r-universe/ggseg/actions/runs/7028170894Wed, 10 Nov 2021 15:00:03 GMTggsegAicha0.0.1successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegAicha[ggseg] ggsegCampbell 0.0.1a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d packages.
It contains the Campbell (1905) atlases to plot using functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/6838664670Wed, 10 Nov 2021 14:56:17 GMTggsegCampbell0.0.1successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegCampbell[ggseg] ggsegIca 0.0.1a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d packages.
It contains the ica atlases to plot using functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/6838664669Wed, 10 Nov 2021 14:54:36 GMTggsegIca0.0.1successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegIca[ggseg] ggsegPower 0.0.1a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d packages.
It contains the power atlases to plot using functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/6838664673Wed, 10 Nov 2021 14:18:10 GMTggsegPower0.0.1successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegPower[ggseg] ggsegBrodmann 0.0.1a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d
packages. It contains the brodmann area atlases to plot using
functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/6925690220Wed, 10 Nov 2021 14:15:58 GMTggsegBrodmann0.0.1successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegBrodmann[ggseg] ggsegBrainnetome 0.0.1a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d packages.
It contains the Brainnetome atlases to plot using functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/6838614648Thu, 14 Oct 2021 11:45:09 GMTggsegBrainnetome0.0.1successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegBrainnetome[ggseg] ggsegDesterieux 1.0.1.002a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d
packages. It contains the Desterieux atlases to plot using
functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/6953028896Thu, 03 Jun 2021 14:01:16 GMTggsegDesterieux1.0.1.002successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegDesterieux[ggseg] ggsegJHU 1.0.1.001a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d
packages. It contains the JHU atlases to plot using functions
from those two packages.https://github.com/r-universe/ggseg/actions/runs/6965718165Thu, 03 Jun 2021 12:59:01 GMTggsegJHU1.0.1.001successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegJHU[ggseg] ggsegDefaultExtra 1.0.01a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d packages.
It contains the extra dk and aseg, with some minor differences from the original
atlases to plot using functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/6838614645Thu, 03 Jun 2021 12:58:37 GMTggsegDefaultExtra1.0.01successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegDefaultExtra[ggseg] ggsegDKT 1.0.1.001a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d
packages. It contains the DKT atlases to plot using functions
from those two packages.https://github.com/r-universe/ggseg/actions/runs/6987165355Thu, 03 Jun 2021 12:47:12 GMTggsegDKT1.0.1.001successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegDKT[ggseg] ggsegTracula 1.0.1.001a.m.mowinckel@psykologi.uio.no (Athanasia Mo Mowinckel)This is a support package for the ggseg, and ggseg3d packages.
It contains the Tracula atlases to plot using functions from those two packages.https://github.com/r-universe/ggseg/actions/runs/6838614661Thu, 03 Jun 2021 12:31:46 GMTggsegTracula1.0.1.001successhttps://ggseg.r-universe.devhttps://github.com/ggseg/ggsegTracula